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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925547.1_cds_XP_016473766.1_65861
CDS Infomation

[gene=LOC107795619] [db_xref=GeneID:107795619] [protein=probable inactive shikimate kinase like 1, chloroplastic isoform X2] [protein_id=XP_016473766.1] [location=complement(join(39393..39461,39565..39629,39710..39788,39949..40072,40168..40250,40344..40431,40518..40590,42210..42378))] [gbkey=CDS]
Sequence

ATGAAGCTATTCCAATTGCCTCAGCAATTGTGGCTGCAACAACCATACGCCGGCAAGTCT
GGCCATTCTCAGCTTCCTCCTCCTACTCATCTTCCTTATTCAATTCCCTCTCTCAGGCTC
AAAATTCGCACCTTCACACTCCTAGCACTTTCCGACCCTGGTGCTTCCGGCTTAAACAGC
TCCATCAAATCTAACTTGGGAAAACTTCTTGCAGATGCACTGCGCTATTATTATTTTGAC
AGTGACAGTGTCGTTGAAGAAGCTTTGGGAGGAAAGGATGCTGTCAGGTCATTTGTGAAG
ACAGACTTGAAGGGCTTTCGAGACTCAGAAACGGAGGTACTGAAGCAGTTATCGTCCATG
GGTCGCCTTGTTATTGGTGCTGGGAATGGTGCGGTTCAGCGTGCAGCTAATCTGGCGCTT
ATGAGACACGGCATATCAATATGGATTGACGTCCCCTTGGATATGGTAGCCAAGGAAATT
GTGGAGGAGAGTTTTCAACCTCCTGCTTCTGAAACAATAAAAGGAGCATATCCCGAGGTG
TTGACTCAATTAACTGCTATTTATGAAGAAAGCCGTAAGGGATATGCTACAGCTGATACA
ACTATCGCACTCCAGAAGGTTGCTTCTCGGTTAGGCTATGATACACTAGATGCAGTAACC
ACAGAGGATATGGTTTTGGAGACTCTGAAGGAGATAGAGAGATTGATGAGAGTAAAGAAG
TTGATGGAAGAAGCTGCCAGGCCATTTTAG

Peptide Sequence

PEP ID

XP_016473766.1
PEP Infomation

PREDICTED: probable inactive shikimate kinase like 1, chloroplastic isoform X2 [Nicotiana tabacum]
Sequence

MKLFQLPQQLWLQQPYAGKSGHSQLPPPTHLPYSIPSLRLKIRTFTLLALSDPGASGLNS
SIKSNLGKLLADALRYYYFDSDSVVEEALGGKDAVRSFVKTDLKGFRDSETEVLKQLSSM
GRLVIGAGNGAVQRAANLALMRHGISIWIDVPLDMVAKEIVEESFQPPASETIKGAYPEV
LTQLTAIYEESRKGYATADTTIALQKVASRLGYDTLDAVTTEDMVLETLKEIERLMRVKK
LMEEAARPF

Transcript Sequence

Gene sequence data has not been registered.